{
  "_id": "6a1e862f1d7bb097a0a67226",
  "Package": "HCPclust",
  "Title": "Hierarchical Conformal Prediction for Clustered Data with\nMissing Responses",
  "Version": "0.1.2",
  "Authors@R": "c(\nperson(\"Menghan\", \"Yi\",email = \"menghany@umich.edu\", role = c(\"aut\", \"cre\")),\nperson(\"Judy\", \"Wang\", role = \"aut\")\n)",
  "Description": "Implements hierarchical conformal prediction for clustered\ndata with missing responses. The method uses repeated\ncluster-level splitting and within-cluster subsampling to\naccommodate dependence, and inverse-probability weighting to\ncorrect distribution shift induced by missingness. Conditional\ndensities are estimated by inverting fitted conditional\nquantiles (linear quantile regression or quantile regression\nforests), and p-values are aggregated across resampling and\nsplitting steps using the Cauchy combination test.",
  "License": "MIT + file LICENSE",
  "Encoding": "UTF-8",
  "Roxygen": "list(markdown = TRUE)",
  "RoxygenNote": "7.3.3",
  "URL": "https://github.com/judywangstat/HCP",
  "BugReports": "https://github.com/judywangstat/HCP/issues",
  "Config/testthat/edition": "3",
  "Config/pak/sysreqs": "make",
  "Repository": "https://judywangstat.r-universe.dev",
  "Date/Publication": "2026-05-02 14:47:50 UTC",
  "RemoteUrl": "https://github.com/judywangstat/hcp",
  "RemoteRef": "HEAD",
  "RemoteSha": "d14edc3a0393ec8708a150c38242085708454b37",
  "NeedsCompilation": "no",
  "Packaged": {
    "Date": "2026-06-02 07:24:34 UTC",
    "User": "root"
  },
  "Author": "Menghan Yi [aut, cre],\nJudy Wang [aut]",
  "Maintainer": "Menghan Yi <menghany@umich.edu>",
  "MD5sum": "0a9ea7c07537668885990a3789e1450e",
  "_user": "judywangstat",
  "_type": "src",
  "_file": "HCPclust_0.1.2.tar.gz",
  "_fileid": "246530536d0d6787523c829bb4329d625e4f3c76559ca025063d4ebec9a12268",
  "_filesize": 271259,
  "_sha256": "246530536d0d6787523c829bb4329d625e4f3c76559ca025063d4ebec9a12268",
  "_created": "2026-06-02T07:24:34.000Z",
  "_published": "2026-06-02T07:28:47.809Z",
  "_distro": "noble",
  "_jobs": [
    {
      "job": 79020168626,
      "time": 120,
      "config": "linux-devel-x86_64",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7351471452"
    },
    {
      "job": 79020168606,
      "time": 137,
      "config": "linux-release-x86_64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7351476758"
    },
    {
      "job": 79020168640,
      "time": 189,
      "config": "macos-oldrel-arm64",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7351483179"
    },
    {
      "job": 79020168601,
      "time": 216,
      "config": "macos-release-arm64",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7351487582"
    },
    {
      "job": 79019665512,
      "time": 206,
      "config": "source",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7351434826"
    },
    {
      "job": 79020168627,
      "time": 114,
      "config": "wasm-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7351469637"
    },
    {
      "job": 79020168595,
      "time": 100,
      "config": "windows-devel",
      "r": "4.7.0",
      "check": "OK",
      "artifact": "7351466045"
    },
    {
      "job": 79020168617,
      "time": 89,
      "config": "windows-oldrel",
      "r": "4.5.3",
      "check": "OK",
      "artifact": "7351461826"
    },
    {
      "job": 79020168651,
      "time": 81,
      "config": "windows-release",
      "r": "4.6.0",
      "check": "OK",
      "artifact": "7351459441"
    }
  ],
  "_buildurl": "https://github.com/r-universe/judywangstat/actions/runs/26804818339",
  "_status": "success",
  "_host": "GitHub-Actions",
  "_upstream": "https://github.com/judywangstat/hcp",
  "_commit": {
    "id": "d14edc3a0393ec8708a150c38242085708454b37",
    "author": "Menghan <ymh_neau@163.com>",
    "committer": "GitHub <noreply@github.com>",
    "message": "Update DESCRIPTION",
    "time": 1777733270
  },
  "_maintainer": {
    "name": "Menghan Yi",
    "email": "menghany@umich.edu",
    "login": "menghan898",
    "description": "",
    "uuid": 234514171
  },
  "_registered": true,
  "_dependencies": [
    {
      "package": "stats",
      "role": "Imports"
    },
    {
      "package": "grf",
      "role": "Imports"
    },
    {
      "package": "quantreg",
      "role": "Imports"
    },
    {
      "package": "xgboost",
      "role": "Imports"
    },
    {
      "package": "quantregForest",
      "role": "Imports"
    },
    {
      "package": "foreach",
      "role": "Suggests"
    },
    {
      "package": "doParallel",
      "role": "Suggests"
    },
    {
      "package": "doRNG",
      "role": "Suggests"
    },
    {
      "package": "parallel",
      "role": "Suggests"
    },
    {
      "package": "testthat",
      "version": ">= 3.0.0",
      "role": "Suggests"
    },
    {
      "package": "knitr",
      "role": "Suggests"
    },
    {
      "package": "rmarkdown",
      "role": "Suggests"
    },
    {
      "package": "FNN",
      "role": "Suggests"
    },
    {
      "package": "lqmix",
      "role": "Suggests"
    },
    {
      "package": "rstudioapi",
      "role": "Suggests"
    }
  ],
  "_owner": "judywangstat",
  "_selfowned": true,
  "_usedby": 0,
  "_updates": [
    {
      "week": "2026-05",
      "n": 40
    },
    {
      "week": "2026-18",
      "n": 17
    }
  ],
  "_tags": [],
  "_stars": 0,
  "_contributors": [
    {
      "user": "menghan919",
      "count": 51,
      "uuid": 200279609
    }
  ],
  "_userbio": {
    "uuid": 200277797,
    "type": "user",
    "name": "Huixia Judy Wang",
    "description": "Professor of Statistics\r\n"
  },
  "_downloads": {
    "count": 114,
    "source": "https://cranlogs.r-pkg.org/downloads/total/last-month/HCPclust"
  },
  "_devurl": "https://github.com/judywangstat/hcp",
  "_rbuild": "4.6.0",
  "_assets": [
    "extra/citation.cff",
    "extra/citation.html",
    "extra/citation.json",
    "extra/citation.txt",
    "extra/contents.json",
    "extra/HCPclust.html",
    "extra/NEWS.html",
    "extra/NEWS.txt",
    "extra/readme.html",
    "extra/readme.md",
    "manual.pdf"
  ],
  "_homeurl": "https://github.com/judywangstat/hcp",
  "_realowner": "judywangstat",
  "_cranurl": true,
  "_releases": [
    {
      "version": "0.1.1",
      "date": "2026-01-30"
    }
  ],
  "_exports": [
    "fit_cond_density_quantile",
    "fit_missingness_propensity",
    "generate_clustered_mar",
    "hcp_conformal_region",
    "hcp_predict_targets",
    "plot_hcp_intervals"
  ],
  "_help": [
    {
      "page": "fit_cond_density_quantile",
      "title": "Estimate conditional density pi(y|x) via quantile process + quotient estimator",
      "topics": [
        "fit_cond_density_quantile"
      ]
    },
    {
      "page": "fit_missingness_propensity",
      "title": "Fit missingness propensity model P(delta=1 | X) from pooled data",
      "topics": [
        "fit_missingness_propensity"
      ]
    },
    {
      "page": "generate_clustered_mar",
      "title": "Simulate clustered continuous outcomes with covariate-dependent MAR missingness",
      "topics": [
        "generate_clustered_mar"
      ]
    },
    {
      "page": "hcp_conformal_region",
      "title": "HCP conformal prediction region with repeated subsampling and repeated data splitting",
      "topics": [
        "hcp_conformal_region"
      ]
    },
    {
      "page": "hcp_predict_targets",
      "title": "HCP prediction wrapper for multiple measurements with optional per-patient Bonferroni",
      "topics": [
        "hcp_predict_targets"
      ]
    },
    {
      "page": "plot_hcp_intervals",
      "title": "Plot HCP prediction intervals (band vs covariate or intervals by patient)",
      "topics": [
        "plot_hcp_intervals"
      ]
    }
  ],
  "_readme": "https://github.com/judywangstat/hcp/raw/HEAD/README.md",
  "_rundeps": [
    "data.table",
    "DiceKriging",
    "grf",
    "jsonlite",
    "lattice",
    "lmtest",
    "MASS",
    "Matrix",
    "MatrixModels",
    "quantreg",
    "quantregForest",
    "randomForest",
    "RColorBrewer",
    "Rcpp",
    "RcppEigen",
    "sandwich",
    "SparseM",
    "survival",
    "xgboost",
    "zoo"
  ],
  "_score": 3,
  "_indexed": true,
  "_nocasepkg": "hcpclust",
  "_universes": [
    "judywangstat",
    "menghan898"
  ],
  "_binaries": [
    {
      "r": "4.7.0",
      "os": "linux",
      "version": "0.1.2",
      "date": "2026-06-02T07:26:32.000Z",
      "distro": "noble",
      "commit": "d14edc3a0393ec8708a150c38242085708454b37",
      "fileid": "de9a62fdeaf1173e7c5008eec9ac6dd1dc661af4ba98af20397a17b35211e327",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/judywangstat/actions/runs/26804818339"
    },
    {
      "r": "4.6.0",
      "os": "linux",
      "version": "0.1.2",
      "date": "2026-06-02T07:26:45.000Z",
      "distro": "noble",
      "commit": "d14edc3a0393ec8708a150c38242085708454b37",
      "fileid": "ace2b72ebc479c383c0e81b44c507a89877769978f474223e0b703ae52c62ade",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/judywangstat/actions/runs/26804818339"
    },
    {
      "r": "4.5.3",
      "os": "mac",
      "version": "0.1.2",
      "date": "2026-06-02T07:27:07.000Z",
      "commit": "d14edc3a0393ec8708a150c38242085708454b37",
      "fileid": "a406e7422c3ca62a6b36206c3e36b438ebe8589cae4b01bd2ce3dfbb7758b17b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/judywangstat/actions/runs/26804818339"
    },
    {
      "r": "4.6.0",
      "os": "mac",
      "version": "0.1.2",
      "date": "2026-06-02T07:27:12.000Z",
      "commit": "d14edc3a0393ec8708a150c38242085708454b37",
      "fileid": "ed1de1ea29ea528e337800df2c0e67e2f5db696604305fb605aacc74fee84a94",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/judywangstat/actions/runs/26804818339"
    },
    {
      "r": "4.6.0",
      "os": "wasm",
      "version": "0.1.2",
      "date": "2026-06-02T07:26:45.000Z",
      "commit": "d14edc3a0393ec8708a150c38242085708454b37",
      "fileid": "ce6c3d08aaecdab1a1a44902f50efca8d272974ff3da11519a23031d7beb24f0",
      "status": "success",
      "buildurl": "https://github.com/r-universe/judywangstat/actions/runs/26804818339"
    },
    {
      "r": "4.7.0",
      "os": "win",
      "version": "0.1.2",
      "date": "2026-06-02T07:26:10.000Z",
      "commit": "d14edc3a0393ec8708a150c38242085708454b37",
      "fileid": "52a05770e73a53bffbcc4ccd575b98b62dcf1d66a66b1d0e60d036ac5207c23b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/judywangstat/actions/runs/26804818339"
    },
    {
      "r": "4.5.3",
      "os": "win",
      "version": "0.1.2",
      "date": "2026-06-02T07:25:51.000Z",
      "commit": "d14edc3a0393ec8708a150c38242085708454b37",
      "fileid": "e09b96ec6b1accf925f249fca69cbfada48207e9a3e65953e53ccc593f92560b",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/judywangstat/actions/runs/26804818339"
    },
    {
      "r": "4.6.0",
      "os": "win",
      "version": "0.1.2",
      "date": "2026-06-02T07:25:43.000Z",
      "commit": "d14edc3a0393ec8708a150c38242085708454b37",
      "fileid": "1305bf0b4789e3e6eaaacb57cd9cc42a36cd66024963210fb99df27f94d609c3",
      "status": "success",
      "check": "OK",
      "buildurl": "https://github.com/r-universe/judywangstat/actions/runs/26804818339"
    }
  ]
}